SMTL ID : 6reg.1 (1 other biounit)

Crystal structure of Pizza6-S with Zn2+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

12 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.245 Ligands: ZN.2, ZN.12 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.245 ZN.2: 3 residues within 4Å: Chain A: H.245 Ligands: ZN.1, ZN.3 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.245, H2O.1, H2O.10 ZN.3: 3 residues within 4Å: Chain A: H.35 Ligands: ZN.2, ZN.4 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.35, H2O.1, H2O.10 ZN.4: 3 residues within 4Å: Chain A: H.35 Ligands: ZN.3, ZN.5 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.35 ZN.5: 3 residues within 4Å: Chain A: H.77 Ligands: ZN.4, ZN.6 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.77 ZN.6: 3 residues within 4Å: Chain A: H.77 Ligands: ZN.5, ZN.7 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.77, H2O.1 ZN.7: 3 residues within 4Å: Chain A: H.119 Ligands: ZN.6, ZN.8 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.119, H2O.1 ZN.8: 3 residues within 4Å: Chain A: H.119 Ligands: ZN.7, ZN.9 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.119 ZN.9: 3 residues within 4Å: Chain A: H.161 Ligands: ZN.8, ZN.10 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.161 ZN.10: 3 residues within 4Å: Chain A: H.161 Ligands: ZN.9, ZN.11 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.161, H2O.10 ZN.11: 3 residues within 4Å: Chain A: H.203 Ligands: ZN.10, ZN.12 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.203, H2O.10 ZN.12: 3 residues within 4Å: Chain A: H.203 Ligands: ZN.1, ZN.11 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.203

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.13: 9 residues within 4Å: Chain A: Y.31, K.42, L.53, P.54, L.85, A.86, A.87, G.88, S.89 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.42, A:K.42, A:G.88, A:S.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clarke, D.E. et al., Artificial beta-propeller protein-based hydrolases. Chem.Commun.(Camb.) (2019)

Release Date

2019-07-31

Peptides

Pizza6-S: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pizza6-S

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