SMTL ID : 6rgs.1

Crystal Structure of Phenylalanine Ammonia Lyase (PAL) from Petroselinum crispum bound to cinnamate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.42 Å

Oligo State

homo-tetramer

Ligands

2 x K3Z: (E)-3-(4-methoxyphenyl)acrylic acid(Non-covalent)

K3Z.1: 16 residues within 4Å: Chain A: Y.375, R.378 Chain B: L.160, F.163, L.164, X.228, L.230, L.280, N.284, N.408, F.424, E.508, Q.512 Chain C: K.480, G.481, V.484 9 PLIP interactions: 1 interactions with chain A, 8 interactions with chain B Salt bridges: A:R.378 Hydrophobic interactions: B:L.160, B:F.163, B:L.230, B:L.230, B:L.280 Hydrogen bonds: B:N.284, B:N.408, B:N.408 K3Z.2: 16 residues within 4Å: Chain A: K.480, G.481, V.484 Chain C: Y.375, R.378 Chain D: L.160, F.163, L.164, X.228, L.230, L.280, N.284, N.408, F.424, E.508, Q.512 9 PLIP interactions: 8 interactions with chain D, 1 interactions with chain C Hydrophobic interactions: D:L.160, D:F.163, D:L.230, D:L.230, D:L.280 Hydrogen bonds: D:N.284, D:N.408, D:N.408 Salt bridges: C:R.378

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagy, E.Z.A. et al., Mapping the Hydrophobic Substrate Binding Site of Phenylalanine Ammonia Lyase from Petroselinum crispum. Acs Catalysis (2019)

Release Date

2019-09-04

Peptides

Phenylalanine ammonia-lyase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Phenylalanine ammonia-lyase 1