- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MUA: 9-METHYL URIC ACID(Non-covalent)
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.2: 4 residues within 4Å:- Chain A: Q.159, W.161, W.175, N.224
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:W.161
- Hydrogen bonds: A:Q.159
MPD.6: 4 residues within 4Å:- Chain B: Q.159, W.161, W.175, N.224
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:W.161
- Hydrogen bonds: B:Q.159
MPD.10: 4 residues within 4Å:- Chain C: Q.159, W.161, W.175, N.224
2 PLIP interactions:2 interactions with chain C- Hydrophobic interactions: C:W.161
- Hydrogen bonds: C:Q.159
MPD.14: 4 residues within 4Å:- Chain D: Q.159, W.161, W.175, N.224
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:W.161
- Hydrogen bonds: D:Q.159
- 8 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.3: 7 residues within 4Å:- Chain A: V.4, K.5, A.6, A.7, G.41, I.43, E.44
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:K.5, A:G.41, A:I.43, A:E.44, A:E.44
- Water bridges: A:A.7, A:A.7, A:G.41, A:G.41
TRS.4: 8 residues within 4Å:- Chain A: D.12, N.13, T.34, V.35, C.36, N.101, I.102, V.103
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.12, A:N.13, A:C.36, A:N.101, A:V.103
- Water bridges: A:D.12, A:D.12
TRS.7: 7 residues within 4Å:- Chain B: V.4, K.5, A.6, A.7, G.41, I.43, E.44
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:K.5, B:G.41, B:I.43, B:E.44, B:E.44
- Water bridges: B:A.7, B:A.7, B:G.41, B:G.41
TRS.8: 8 residues within 4Å:- Chain B: D.12, N.13, T.34, V.35, C.36, N.101, I.102, V.103
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:D.12, B:N.13, B:C.36, B:N.101, B:V.103
- Water bridges: B:D.12, B:D.12
TRS.11: 7 residues within 4Å:- Chain C: V.4, K.5, A.6, A.7, G.41, I.43, E.44
11 PLIP interactions:11 interactions with chain C- Hydrogen bonds: C:K.5, C:G.41, C:I.43, C:E.44
- Water bridges: C:A.7, C:A.7, C:E.40, C:E.40, C:E.40, C:G.41, C:G.41
TRS.12: 8 residues within 4Å:- Chain C: D.12, N.13, T.34, V.35, C.36, N.101, I.102, V.103
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:D.12, C:N.13, C:C.36, C:N.101, C:V.103
- Water bridges: C:D.12, C:D.12
TRS.15: 7 residues within 4Å:- Chain D: V.4, K.5, A.6, A.7, G.41, I.43, E.44
11 PLIP interactions:11 interactions with chain D- Hydrogen bonds: D:K.5, D:G.41, D:I.43, D:E.44
- Water bridges: D:A.7, D:A.7, D:E.40, D:E.40, D:E.40, D:G.41, D:G.41
TRS.16: 8 residues within 4Å:- Chain D: D.12, N.13, T.34, V.35, C.36, N.101, I.102, V.103
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:D.12, D:N.13, D:C.36, D:N.101, D:V.103
- Water bridges: D:D.12, D:D.12
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bui, S. et al., Crystal structure of the cofactor-free Aspergillus flavus urate oxidase T57A variant anaerobically complexed with 9-methyl uric acid. To Be Published
- Release Date
- 2020-05-13
- Peptides
- Uricase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MUA: 9-METHYL URIC ACID(Non-covalent)
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 8 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bui, S. et al., Crystal structure of the cofactor-free Aspergillus flavus urate oxidase T57A variant anaerobically complexed with 9-methyl uric acid. To Be Published
- Release Date
- 2020-05-13
- Peptides
- Uricase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A