6rnj.1 | SWISS-MODEL Template Library

SMTL ID : 6rnj.1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-trimer

Ligands

3 x RET: RETINAL(Covalent)

RET.1:	21 residues within 4Å: Chain A: Y.79, W.82, T.85, T.86, L.89, M.114, I.115, G.118, W.134, S.137, T.138, M.141, L.177, W.178, Y.181, P.182, W.185, F.204, D.208, A.211, K.212 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:W.82, A:W.82, A:T.86, A:W.178, A:W.178, A:Y.181, A:Y.181, A:Y.181, A:P.182, A:W.185, A:W.185, A:A.211, A:K.212
RET.2:	21 residues within 4Å: Chain B: Y.79, W.82, T.85, T.86, L.89, M.114, I.115, G.118, W.134, S.137, T.138, M.141, L.177, W.178, Y.181, P.182, W.185, F.204, D.208, A.211, K.212 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:W.82, B:W.82, B:T.86, B:W.178, B:W.178, B:Y.181, B:Y.181, B:Y.181, B:P.182, B:W.185, B:W.185, B:A.211, B:K.212
RET.3:	21 residues within 4Å: Chain C: Y.79, W.82, T.85, T.86, L.89, M.114, I.115, G.118, W.134, S.137, T.138, M.141, L.177, W.178, Y.181, P.182, W.185, F.204, D.208, A.211, K.212 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:W.82, C:W.82, C:T.86, C:W.178, C:W.178, C:Y.181, C:Y.181, C:Y.181, C:P.182, C:W.185, C:W.185, C:A.211, C:K.212

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Weinert, T. et al., Proton uptake mechanism in bacteriorhodopsin captured by serial synchrotron crystallography. Science (2019)

Release Date

2019-07-17

Peptides

Bacteriorhodopsin: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide