SMTL ID : 6rns.1

Crystal structure of the dimerization domain of Gemin5 at 2.7 A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

homo-dimer

Ligands

13 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 4 residues within 4Å: Chain A: A.29, K.30, T.53, D.54 Ligand excluded by PLIP IOD.2: 8 residues within 4Å: Chain A: L.70, P.75, F.78, H.79, T.94, A.95, R.98, E.100 Ligand excluded by PLIP IOD.3: 3 residues within 4Å: Chain A: Y.195, A.196, K.218 Ligand excluded by PLIP IOD.4: 3 residues within 4Å: Chain A: L.88, A.111 Chain B: H.145 Ligand excluded by PLIP IOD.5: 5 residues within 4Å: Chain A: A.125, K.126, C.129, L.141, L.153 Ligand excluded by PLIP IOD.6: 6 residues within 4Å: Chain B: E.76, H.79, Q.80, T.102, N.104, L.105 Ligand excluded by PLIP IOD.7: 4 residues within 4Å: Chain B: H.194, Y.195, A.196, K.218 Ligand excluded by PLIP IOD.8: 5 residues within 4Å: Chain A: L.142, S.143, R.170 Chain B: L.83, L.88 Ligand excluded by PLIP IOD.9: 4 residues within 4Å: Chain B: A.221, A.222, R.225, C.247 Ligand excluded by PLIP IOD.10: 6 residues within 4Å: Chain B: L.70, P.75, F.78, H.79, R.98, E.100 Ligand excluded by PLIP IOD.11: 3 residues within 4Å: Chain A: H.145 Chain B: L.88, A.112 Ligand excluded by PLIP IOD.12: 5 residues within 4Å: Chain A: T.206, A.208, V.234 Chain B: K.30, H.31 Ligand excluded by PLIP IOD.13: 4 residues within 4Å: Chain B: A.29, K.30, T.53, D.54 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moreno-Morcillo, M. et al., Structural basis for the dimerization of Gemin5 and its role in protein recruitment and translation control. Nucleic Acids Res. (2020)

Release Date

2019-11-27

Peptides

Gem-associated protein 5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Gem-associated protein 5

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