- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 5 residues within 4Å:- Chain A: K.520, T.521, V.633
- Chain D: R.267
- Ligands: ATP.1
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:T.521
MG.4: 4 residues within 4Å:- Chain D: K.108, T.109, C.250
- Ligands: ATP.3
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:T.109
MG.6: 2 residues within 4Å:- Chain E: T.44
- Ligands: ATP.5
1 PLIP interactions:1 interactions with chain E- Metal complexes: E:T.44
- 4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.7: 14 residues within 4Å:- Chain G: I.505, P.545, G.546, T.547, A.548, K.549, S.550, Q.551, E.608, N.651, L.695, V.699
- Chain K: P.704, R.798
6 PLIP interactions:5 interactions with chain G, 1 interactions with chain K- Hydrogen bonds: G:K.549, G:S.550, G:E.608, G:E.608, G:N.651, K:R.798
ADP.9: 18 residues within 4Å:- Chain H: I.406, Y.407, G.408, H.409, P.446, S.447, T.448, A.449, K.450, S.451, Q.452, I.596, V.600
- Chain J: L.406, E.498, R.549, I.650, R.651
10 PLIP interactions:7 interactions with chain H, 3 interactions with chain J- Hydrogen bonds: H:Y.407, H:Y.407, H:P.446, H:T.448, H:S.451, H:Q.452, H:Q.452
- Salt bridges: J:R.549, J:R.651, J:R.651
ADP.11: 17 residues within 4Å:- Chain G: H.531, S.675, V.807, R.808, E.811
- Chain J: I.378, F.379, N.381, P.418, G.419, T.420, A.421, K.422, S.423, Q.424, I.568, V.572
7 PLIP interactions:7 interactions with chain J- Hydrogen bonds: J:G.419, J:G.419, J:A.421, J:S.423, J:S.423, J:Q.424
- Salt bridges: J:K.422
ADP.14: 16 residues within 4Å:- Chain H: L.434, H.522, E.526, R.577, R.735
- Chain L: Y.423, G.463, V.464, A.465, K.466, S.467, Q.468, E.525, N.568, L.612, V.616
7 PLIP interactions:1 interactions with chain H, 6 interactions with chain L- Salt bridges: H:R.577
- Hydrogen bonds: L:A.465, L:K.466, L:S.467, L:Q.468, L:Q.468, L:E.525
- 5 x ZN: ZINC ION(Non-covalent)
ZN.8: 6 residues within 4Å:- Chain G: K.343, C.344, C.364, N.366, C.367, S.369
1 PLIP interactions:1 interactions with chain G- Metal complexes: G:S.369
ZN.10: 5 residues within 4Å:- Chain I: C.349, V.351, C.352, C.371, C.376
4 PLIP interactions:4 interactions with chain I- Metal complexes: I:C.349, I:C.352, I:C.371, I:C.376
ZN.12: 5 residues within 4Å:- Chain J: C.183, C.186, C.211, C.236, P.240
3 PLIP interactions:3 interactions with chain J- Metal complexes: J:C.183, J:C.186, J:C.211
ZN.13: 5 residues within 4Å:- Chain K: C.311, C.314, C.333, N.335, C.338
3 PLIP interactions:3 interactions with chain K- Metal complexes: K:C.311, K:C.333, K:C.338
ZN.15: 5 residues within 4Å:- Chain L: C.262, C.265, C.284, S.286, C.289
3 PLIP interactions:3 interactions with chain L- Metal complexes: L:C.265, L:C.284, L:C.289
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miller, T.C.R. et al., Mechanism of head-to-head MCM double-hexamer formation revealed by cryo-EM. Nature (2019)
- Release Date
- 2019-11-20
- Peptides
- Origin recognition complex subunit 1: A
Origin recognition complex subunit 2: B
Origin recognition complex subunit 3: C
Origin recognition complex subunit 4: D
Origin recognition complex subunit 5: E
Origin recognition complex subunit 6: F
DNA replication licensing factor MCM2: G
DNA replication licensing factor MCM3: H
DNA replication licensing factor MCM4: I
Minichromosome maintenance protein 5: J
DNA replication licensing factor MCM6: K
DNA replication licensing factor MCM7: L - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
2H
3I
4J
5K
6L
7
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 5 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miller, T.C.R. et al., Mechanism of head-to-head MCM double-hexamer formation revealed by cryo-EM. Nature (2019)
- Release Date
- 2019-11-20
- Peptides
- Origin recognition complex subunit 1: A
Origin recognition complex subunit 2: B
Origin recognition complex subunit 3: C
Origin recognition complex subunit 4: D
Origin recognition complex subunit 5: E
Origin recognition complex subunit 6: F
DNA replication licensing factor MCM2: G
DNA replication licensing factor MCM3: H
DNA replication licensing factor MCM4: I
Minichromosome maintenance protein 5: J
DNA replication licensing factor MCM6: K
DNA replication licensing factor MCM7: L - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
2H
3I
4J
5K
6L
7