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SMTL ID : 6rqx.1

High-resolution crystal structure of ERAP1 in complex with 10mer phosphinic peptide

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.68 Å
Oligo State
monomer
Ligands
1 x KF2- LYS- HIS- HIS- ALA- PHE- SER- PHE- LYS: PSE-LYS-HIS-HIS-ALA-PHE-SER-PHE-LYS(Non-covalent)
1 x NAG- FUC- NAG: alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x ZN: ZINC ION(Non-covalent)
11 x SCN: THIOCYANATE ION(Non-functional Binders)
22 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
4 x NA: SODIUM ION(Non-functional Binders)
3 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Giastas, P. et al., Mechanism for antigenic peptide selection by endoplasmic reticulum aminopeptidase 1. Proc.Natl.Acad.Sci.USA (2019)
Release Date
2019-12-18
Peptides
Endoplasmic reticulum aminopeptidase 1: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

Endoplasmic reticulum aminopeptidase 1