SMTL ID : 6rr9.1

DNA/RNA binding protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.43 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.266, C.268, C.302, C.303 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.266, A:C.268, A:C.302, A:C.303

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: K.209, S.254 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.209 SO4.3: 5 residues within 4Å: Chain A: F.197, V.198, M.199, R.211, D.233 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.199, A:M.199 Salt bridges: A:R.211 SO4.4: 3 residues within 4Å: Chain A: T.25, V.74, G.75 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.74, A:G.75, A:L.76 SO4.5: 1 residues within 4Å: Chain A: R.83 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.83 SO4.6: 5 residues within 4Å: Chain A: I.81, T.112, D.129, S.130, Q.131 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.112, A:S.130, A:Q.131

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 4 residues within 4Å: Chain A: C.139, R.140, N.221, K.300 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.140, A:K.300, A:K.300

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Metzner, F.J. et al., Structural and biochemical characterization of human Schlafen 5. Nucleic Acids Res. (2022)

Release Date

2020-07-08

Peptides

Schlafen family member 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Schlafen family member 5