SMTL ID : 6ru2.2 (1 other biounit)

Crystal Structure of Glucuronoyl Esterase from Cerrena unicolor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: C.3, A.5, F.24, N.26, T.28 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.28

2 x MAN: alpha-D-mannopyranose(Post Translational Modification)

MAN.2: 7 residues within 4Å: Chain A: T.9, V.10, P.11, N.49, Y.50, Y.257 Ligands: MAN.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.49, A:Y.50, A:Y.50, A:Y.257 Water bridges: A:P.11 MAN.4: 5 residues within 4Å: Chain A: I.6, S.8, T.9, N.49 Ligands: MAN.2 No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: S.192, R.193, K.196, Q.238, E.246, W.249, W.290 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.196, A:K.196, A:Q.238, A:E.246

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 7 residues within 4Å: Chain A: L.173, E.174, T.176, P.177, I.181, T.183 Ligands: NA.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.181, A:T.183, A:T.183 Water bridges: A:I.181

1 x NA: SODIUM ION(Non-functional Binders)

NA.6: 2 residues within 4Å: Chain A: I.181 Ligands: GOL.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.181, A:I.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ernst, H.A. et al., The structural basis of fungal glucuronoyl esterase activity on natural substrates. Nat Commun (2020)

Release Date

2020-03-18

Peptides

4-O-methyl-glucuronoyl methylesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

4-O-methyl-glucuronoyl methylesterase

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