SMTL ID : 6ruv.1

Structure of the SCIN stabilized C3bBb convertase bound to Properdin and a the non-inhibitory nanobody hFPNb1

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 6.15 Å
Oligo State
hetero-2-2-2-2-2-2-2-mer
Ligands
21 x MAN: ALPHA-D-MANNOSE(Post Translational Modification)
7 x FUC: ALPHA-L-FUCOSE(Post Translational Modification)(Non-functional Binders)
5 x BGC: BETA-D-GLUCOSE(Non-functional Binders)(Non-covalent)
20 x NAG: N-ACETYL-D-GLUCOSAMINE(Post Translational Modification)(Non-functional Binders)
2 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Pedersen, D.V. et al., Structural Basis for Properdin Oligomerization and Convertase Stimulation in the Human Complement System. Front Immunol (2019)
Release Date
2019-08-21
Peptides
Nanobody hFPNb1: AB
Properdin: CE
Properdin: DF
Complement C3: GI
Complement C3: HJ
Complement factor B: KL
Inhibitor: MN
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
R
B
S
C
U
E
X
D
V
F
Y
G
A
I
G
H
B
J
H
K
J
L
L
M
N
N
Q