- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x COA: COENZYME A(Non-covalent)
COA.2: 24 residues within 4Å:- Chain A: V.11, A.12, A.15, S.16, A.19, K.20, R.23, S.40, Y.41, C.44, A.62, R.63, F.68, G.299, N.303, R.307
- Chain B: Q.359, S.360, V.431, I.437, Q.441, A.442
- Ligands: FAD.1, VK3.4
16 PLIP interactions:4 interactions with chain B, 12 interactions with chain A- Hydrophobic interactions: B:V.431, A:A.15, A:F.68
- Hydrogen bonds: B:Q.359, B:Q.441, B:A.442, A:S.16, A:N.303, A:N.303
- Salt bridges: A:K.20, A:R.23, A:R.23, A:R.23, A:R.63, A:R.63, A:R.307
COA.6: 25 residues within 4Å:- Chain A: I.358, Q.359, S.360, V.431, I.437, Q.441, A.442
- Chain B: V.11, A.12, A.15, S.16, A.19, K.20, R.23, S.40, Y.41, C.44, A.62, R.63, F.68, G.299, N.303, R.307
- Ligands: VK3.3, FAD.5
18 PLIP interactions:5 interactions with chain A, 13 interactions with chain B- Hydrophobic interactions: A:V.431, B:A.15, B:A.62, B:F.68
- Hydrogen bonds: A:Q.359, A:Q.441, A:A.442, B:N.303, B:N.303
- Water bridges: A:Q.359, B:N.303
- Salt bridges: B:K.20, B:R.23, B:R.23, B:R.23, B:R.63, B:R.63, B:R.307
- 2 x VK3: MENADIONE(Non-covalent)
VK3.3: 6 residues within 4Å:- Chain A: R.361, A.364, H.365, P.430, V.431
- Ligands: COA.6
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:A.364, A:P.430, A:V.431
- Hydrogen bonds: A:H.365
- Water bridges: A:R.361
- pi-Stacking: A:H.365
VK3.4: 6 residues within 4Å:- Chain B: R.361, A.364, H.365, P.430, V.431
- Ligands: COA.2
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:A.364, B:P.430, B:V.431
- pi-Stacking: B:H.365
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lencina, A.M. et al., Characterization and X-ray structure of the NADH-dependent coenzyme A disulfide reductase from Thermus thermophilus. Biochim Biophys Acta Bioenerg (2019)
- Release Date
- 2019-09-25
- Peptides
- NADH oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x COA: COENZYME A(Non-covalent)
- 2 x VK3: MENADIONE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lencina, A.M. et al., Characterization and X-ray structure of the NADH-dependent coenzyme A disulfide reductase from Thermus thermophilus. Biochim Biophys Acta Bioenerg (2019)
- Release Date
- 2019-09-25
- Peptides
- NADH oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B