- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.11 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 4 x KMK: methyl 1-[4-[[2,4-bis(azanyl)pteridin-6-yl]methyl-(3-oxidanylpropyl)amino]phenyl]carbonylpiperidine-4-carboxylate(Non-covalent)
KMK.2: 15 residues within 4Å:- Chain A: R.34, S.115, F.117, Y.118, P.119, D.181, F.191, Y.194, G.225, L.228, L.229, P.230, M.233, W.241
- Ligands: NAP.1
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:P.230, A:W.241
- Hydrogen bonds: A:R.34, A:S.115, A:S.115, A:D.181, A:Y.194, A:Y.194
- pi-Stacking: A:F.117, A:F.117
KMK.4: 13 residues within 4Å:- Chain B: R.34, S.115, F.117, Y.118, D.181, Y.194, G.225, L.228, L.229, P.230, M.233, W.241
- Ligands: NAP.3
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:P.230, B:W.241
- Hydrogen bonds: B:R.34, B:S.115, B:S.115, B:D.181, B:Y.194, B:Y.194
- pi-Stacking: B:F.117, B:F.117
KMK.7: 12 residues within 4Å:- Chain C: R.34, S.115, F.117, D.181, F.191, Y.194, G.225, L.228, L.229, P.230, W.241
- Ligands: NAP.6
9 PLIP interactions:9 interactions with chain C- Hydrophobic interactions: C:P.230, C:W.241
- Hydrogen bonds: C:R.34, C:S.115, C:S.115, C:D.181, C:Y.194
- pi-Stacking: C:F.117, C:F.117
KMK.9: 16 residues within 4Å:- Chain D: R.34, S.115, F.117, Y.118, P.119, D.181, F.191, Y.194, G.225, L.228, L.229, P.230, M.233, E.237, W.241
- Ligands: NAP.8
9 PLIP interactions:9 interactions with chain D- Hydrophobic interactions: D:P.230, D:W.241
- Hydrogen bonds: D:R.34, D:S.115, D:S.115, D:D.181, D:Y.194
- pi-Stacking: D:F.117, D:F.117
- 1 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pohner, I. et al., Multitarget, Selective Compound Design Yields Potent Inhibitors of a Kinetoplastid Pteridine Reductase 1. J.Med.Chem. (2022)
- Release Date
- 2020-07-15
- Peptides
- Pteridine reductase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
SMTL ID : 6rx6.1
Trypanosoma brucei PTR1 (TbPTR1) in complex with inhibitor 4 (NMT-C0026)
Pteridine reductase
Toggle Identical (BD)Related Entries With Identical Sequence
2x9g.1 | 2x9n.1 | 2x9v.1 | 2yhi.1 | 2yhu.1 | 3bmc.1 | 3bmn.1 | 3bmo.1 | 3bmq.1 | 3gn1.1 | 3gn2.1 | 3jq6.1 | 3jq7.1 | 3jq8.1 | 3jq9.1 | 3jqa.1 | 3jqb.1 | 3jqc.1 | 3jqd.1 | 3jqe.1 | 3jqf.1 | 3jqg.1 | 3mcv.1 | 4cl8.1 | 4cld.1 | 4cle.1 | 4clh.1 | 4clo.1 | 4clr.1 | 4clx.1 more...less...4cm1.1 | 4cm3.1 | 4cm4.1 | 4cm5.1 | 4cm6.1 | 4cm7.1 | 4cm8.1 | 4cm9.1 | 4cma.1 | 4cmb.1 | 4cmc.1 | 4cme.1 | 4cmg.1 | 4cmi.1 | 4cmj.1 | 4cmk.1 | 5jcj.1 | 5jcx.1 | 5jdc.1 | 5jdi.1 | 5k6a.1 | 6gcl.1 | 6gcp.1 | 6gcq.1 | 6gd0.1 | 6gd4.1 | 6gdo.1 | 6gdp.1 | 6gex.1 | 6gey.1 | 6hnc.1 | 6hnr.1 | 6how.1 | 6rx0.1 | 6rx5.1 | 6tbx.1 | 7opj.1 | 8of2.1