SMTL ID : 6rx7.1 (2 other biounits)

Structure of the KIV type 2 (KIV-2) domain of lipoprotein (a)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: Y.28, A.83, A.84, Y.98 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.28, A:Y.28 GOL.2: 3 residues within 4Å: Chain A: H.57, S.58, R.95 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.58, A:S.58, A:R.95 GOL.3: 2 residues within 4Å: Chain A: M.73, N.74 1 PLIP interactions: 1 interactions with chain A Water bridges: A:A.50 GOL.4: 5 residues within 4Å: Chain A: H.59, S.60, R.61, Y.88, R.95 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.60, A:R.61, A:R.61, A:R.61, A:Y.88, A:R.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Santonastaso, A. et al., High resolution structure of human apolipoprotein (a) kringle IV type 2: beyond the lysine binding site. J.Lipid Res. (2020)

Release Date

2020-07-08

Peptides

Apolipoprotein(a): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Apolipoprotein(a)

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