SMTL ID : 6s1v.1

Crystal structure of dimeric M-PMV protease D26N mutant in complex with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

1 x PRO- 0A1- VAL- PSA- ALA- MET- THR: PRO-0A1-VAL-PSA-ALA-MET-THR(Non-covalent)

PRO-0A1-VAL-PSA-ALA-MET-THR.1: 25 residues within 4Å: Chain A: K.9, N.26, G.28, A.29, D.30, V.31, I.33, N.51, L.52, R.53, L.92 Chain B: L.24, N.26, G.28, A.29, D.30, V.31, I.33, N.51, L.52, R.53, Q.57, P.89, V.90, L.92 21 PLIP interactions: 13 interactions with chain A, 8 interactions with chain B Hydrophobic interactions: A:A.29, A:V.31, A:R.53, A:L.92, B:L.24, B:L.52, B:P.89, B:V.90, B:L.92 Hydrogen bonds: A:K.9, A:G.28, A:G.28, A:D.30, A:D.30, A:R.53, A:R.53, B:N.26, B:G.28, B:D.30 Water bridges: A:K.9, A:G.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wosicki, S. et al., Comparison of a retroviral protease in monomeric and dimeric states. Acta Crystallogr D Struct Biol (2019)

Release Date

2019-10-16

Peptides

Gag-Pro-Pol polyprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Gag-Pro-Pol polyprotein

Related Entries With Identical Sequence