SMTL ID : 6s36.1

Crystal structure of E. coli Adenylate kinase R119K mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: G.10, A.11, G.12 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain A: K.141, D.147 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain A: I.29, S.30, D.33, M.34, R.71 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 1 residues within 4Å: Chain A: G.100 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.100

2 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.6: 1 residues within 4Å: Chain A: R.71 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rogne, P. et al., Nucleation of an Activating Conformational Change by a Cation-pi Interaction. Biochemistry (2019)

Release Date

2019-08-07

Peptides

Adenylate kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenylate kinase