- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- monomer
- Ligands
- 1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 2 residues within 4Å:- Chain A: M.76, Y.80
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Y.80
EDO.3: 4 residues within 4Å:- Chain A: N.34, F.35, S.36, R.40
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.34, A:F.35, A:R.40
EDO.4: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)EDO.5: 3 residues within 4Å:- Chain A: L.19, G.20, R.95
3 PLIP interactions:3 interactions with chain A- Water bridges: A:G.20, A:G.20, A:R.95
EDO.6: 1 residues within 4Å:- Chain A: F.47
No protein-ligand interaction detected (PLIP)EDO.7: 6 residues within 4Å:- Chain A: Y.30, V.31, Q.33, L.49, K.50, V.51
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:V.31, A:Q.33, A:V.51
EDO.8: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)EDO.9: 5 residues within 4Å:- Chain A: V.93, A.127, N.140, M.144, E.158
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.140
EDO.10: 3 residues within 4Å:- Chain A: F.99, E.100, A.103
2 PLIP interactions:2 interactions with chain A- Water bridges: A:E.100, A:H.151
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 3 x BR: BROMIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Diaz-Saez, L. et al., Structure of the human RAB38 in complex with GTP. To Be Published
- Release Date
- 2020-07-22
- Peptides
- Ras-related protein Rab-38: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- monomer
- Ligands
- 1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 3 x BR: BROMIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Diaz-Saez, L. et al., Structure of the human RAB38 in complex with GTP. To Be Published
- Release Date
- 2020-07-22
- Peptides
- Ras-related protein Rab-38: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A