SMTL ID : 6s5u.1 (5 other biounits)

Strictosidine Synthase from Ophiorrhiza pumila in complex with N-[2-(1H-Indol-3-yl)ethyl]-3-methyl-1-butanamine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

monomer

Ligands

2 x KWK: ~{N}-[2-(1~{H}-indol-3-yl)ethyl]-3-methyl-butan-1-amine(Non-covalent)

KWK.1: 10 residues within 4Å: Chain A: Y.125, V.141, V.150, I.182, P.183, G.184, F.200, H.277, E.279, F.294 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.125, A:V.141, A:V.150, A:I.182, A:F.200, A:H.277 Hydrogen bonds: A:H.277 Water bridges: A:H.277, A:E.279 pi-Stacking: A:F.294 KWK.2: 7 residues within 4Å: Chain A: E.9, I.11, G.27, Y.41, K.43, F.289, I.300 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.11, A:Y.41, A:Y.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eger, E. et al., Inverted Binding of Non-natural Substrates in Strictosidine Synthase Leads to a Switch of Stereochemical Outcome in Enzyme-Catalyzed Pictet-Spengler Reactions. J.Am.Chem.Soc. (2020)

Release Date

2020-04-08

Peptides

Strictosidine synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Strictosidine synthase

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