SMTL ID : 6s6f.1

Crystal structure of 2-methylcitrate synthase (PrpC) from Pseudomonas aeruginosa in apo form.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

homo-dimer

Ligands

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: Y.184, H.222, G.223, G.224, A.225, N.226, D.312, T.330, F.333 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.224, A:A.225, A:N.226, A:D.312, A:T.330 Water bridges: A:D.312 GOL.2: 6 residues within 4Å: Chain A: E.111, P.112, Q.118, D.121, V.122, R.125 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.112, A:Q.118, A:R.125 GOL.3: 8 residues within 4Å: Chain B: H.95, M.97, R.218, P.220, G.223, G.224, E.227, T.330 5 PLIP interactions: 5 interactions with chain B Water bridges: B:H.95, B:G.223, B:G.224, B:E.227, B:T.330 GOL.4: 8 residues within 4Å: Chain B: H.222, G.223, G.224, A.225, N.226, D.312, T.330, F.333 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:H.222, B:G.224, B:A.225, B:N.226, B:N.226, B:D.312, B:T.330 GOL.5: 1 residues within 4Å: Chain B: H.320 1 PLIP interactions: 1 interactions with chain B Water bridges: B:H.320

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 5 residues within 4Å: Chain B: K.72, Q.76, D.121, D.124, R.125 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wijaya, A.J. et al., Crystal structure of 2-methylcitrate synthase (PrpC) from Pseudomonas aeruginosa in apo form. To Be Published

Release Date

2020-10-14

Peptides

Citrate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Citrate synthase

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