SMTL ID : 6s6h.1

Crystal structure of the DNA binding domain of the chromosome-partitioning protein ParB complexed to the centromeric parS site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: N.19, V.20, T.75, A.76 Chain D: T.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.20, A:A.76 GOL.2: 8 residues within 4Å: Chain A: V.20, H.51, N.54, T.55, A.76, G.77, R.80 Chain D: G.13 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.51, A:T.55, A:A.76, A:R.80 Water bridges: A:S.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jalal, A.S.B. et al., Diversification of DNA-Binding Specificity by Permissive and Specificity-Switching Mutations in the ParB/Noc Protein Family. Cell Rep (2020)

Release Date

2020-07-15

Peptides

Chromosome-partitioning protein ParB: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Chromosome-partitioning protein ParB