SMTL ID : 6s7t.1

Cryo-EM structure of human oligosaccharyltransferase complex OST-B

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x ALA- ALA- ASN- ALA- THR- ALA- ALA: PEPTIDE(Non-covalent)
8 x NAG: N-ACETYL-D-GLUCOSAMINE(Post Translational Modification)(Non-functional Binders)(Non-covalent)
2 x BMA: BETA-D-MANNOSE(Non-covalent)
10 x MAN: ALPHA-D-MANNOSE(Non-covalent)(Non-functional Binders)
10 x EGY: (4R,7R)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(undecanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphadocosan-1-aminium(Non-covalent)
13 x KZB: (2~{S},3~{R},4~{R},5~{S},6~{S})-2-(hydroxymethyl)-6-[(1~{S},2~{R},3~{R},4~{R},5'~{S},6~{S},7~{R},8~{S},9~{R},12~{R},13~{R},15~{S},16~{S},18~{R})-5',7,9,13-tetramethyl-3,15-bis(oxidanyl)spiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2'-oxane]-16-yl]oxy-oxane-3,4,5-triol(Non-covalent)
2 x MG: MAGNESIUM ION(Non-covalent)
1 x 0K3: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl dihydrogen phosphate(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Ramirez, A.S. et al., Cryo-electron microscopy structures of human oligosaccharyltransferase complexes OST-A and OST-B. Science (2019)
Release Date
2019-12-18
Peptides
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B: A
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4: B
Transmembrane protein 258: C
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1: D
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1: E
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2: F
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit: G
Magnesium transporter protein 1: H
Malectin: I
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4

Transmembrane protein 258

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit

Magnesium transporter protein 1

Malectin

Related Entries With Identical Sequence

2lat.1 | 6s7o.1