SMTL ID : 6s86.1

Human wtSTING in complex with 3'3'-c-di-GMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x C2E: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)(Non-covalent)

C2E.1: 29 residues within 4Å: Chain A: S.23, Y.24, G.27, Y.28, R.93, I.96, R.99, V.100, Y.101, S.102, E.121, T.124, P.125, T.128 Chain B: S.23, Y.24, G.27, Y.28, R.93, I.96, R.99, V.100, Y.101, S.102, N.103, E.121, T.124, P.125, T.128 29 PLIP interactions: 14 interactions with chain A, 15 interactions with chain B Hydrogen bonds: A:R.99, A:S.102, A:S.102, A:S.102, A:T.124, B:R.99, B:S.102, B:S.102, B:S.102, B:T.124, B:T.128 Water bridges: A:R.93, A:R.93, A:E.121, A:E.121, B:Y.24, B:Y.24, B:R.99, B:R.99 Salt bridges: A:R.99, A:E.121, B:R.93, B:R.99, B:E.121 pi-Stacking: A:Y.28 pi-Cation interactions: A:R.99, A:R.99, B:R.99, B:R.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smola, M. et al., No magnesium is needed for binding of the stimulator of interferon genes to cyclic dinucleotides. Acta Crystallogr.,Sect.F (2019)

Release Date

2019-07-17

Peptides

Stimulator of Interferon genes: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Stimulator of Interferon genes

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