SMTL ID : 6s9o.1 (5 other biounits)

Designed Armadillo Repeat protein internal Lock1 fused to target peptide KRKRKLKFKR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.17 Å

Oligo State

monomer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: P.268, E.270 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:P.268, A:E.270, A:E.270 CA.2: 2 residues within 4Å: Chain A: P.184, E.186 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.184, A:E.186, H2O.1 CA.3: 2 residues within 4Å: Chain A: P.142, E.144 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.142, A:E.144 CA.4: 2 residues within 4Å: Chain A: P.100, E.102 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.100, A:E.102 CA.5: 2 residues within 4Å: Chain A: P.226, E.228 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:P.226, A:E.228, A:E.228

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 2 residues within 4Å: Chain A: Q.40, D.44 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.44 EDO.7: 4 residues within 4Å: Chain A: S.182, A.218, Q.221, L.222 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ernst, P. et al., Structure-Guided Design of a Peptide Lock for Modular Peptide Binders. Acs Chem.Biol. (2020)

Release Date

2020-02-19

Peptides

designed Armadillo repeat protein with internal Lock1 fused to target peptide KRKRKLKFKR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

designed Armadillo repeat protein with internal Lock1 fused to target peptide KRKRKLKFKR

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