SMTL ID : 6sa5.1

SALSA / DMBT1 / GP340 SRCR domain 8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.29 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.65 8 PLIP interactions: 8 interactions with chain A Water bridges: A:R.65, A:R.65, A:R.65, A:R.65, A:R.65, A:R.65, A:G.70 Salt bridges: A:R.65

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: D.92, R.94 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.94, A:R.94 GOL.3: 4 residues within 4Å: Chain A: S.74, P.76, R.80, I.124 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.80

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 6 residues within 4Å: Chain A: S.54, W.55, D.56, D.59, V.93, R.94 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.54, A:D.59, A:V.93, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reichhardt, M.P. et al., Structures of SALSA/DMBT1 SRCR domains reveal the conserved ligand-binding mechanism of the ancient SRCR fold. Life Sci Alliance (2020)

Release Date

2020-03-18

Peptides

Deleted in malignant brain tumors 1 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Deleted in malignant brain tumors 1 protein

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