SMTL ID : 6saz.1 (1 other biounit)

Cleaved human fetuin-b in complex with crayfish astacin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG- BMA- FUC: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-FUC.1: 2 residues within 4Å: Chain B: N.37, P.371 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 3 residues within 4Å: Chain B: K.118, N.136, T.138 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.138

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 5 residues within 4Å: Chain A: H.92, H.96, H.102, Y.149 Chain B: D.153 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Metal complexes: A:H.92, A:H.96, A:H.102, B:D.153, B:D.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guevara, T. et al., The C-terminal region of human plasma fetuin-B is dispensable for the raised-elephant-trunk mechanism of inhibition of astacin metallopeptidases. Sci Rep (2019)

Release Date

2019-10-23

Peptides

Astacin: A
Fetuin-B: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Astacin

Fetuin-B

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