SMTL ID : 6sbo.1

Estrogen receptor mutant L536S

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

homo-dimer

Ligands

2 x L5B: 6-(2,4-dichlorophenyl)-5-[4-[(3~{S})-1-(3-fluoranylpropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7~{H}-benzo[7]annulene-2-carboxylic acid(Non-covalent)

L5B.1: 26 residues within 4Å: Chain A: M.49, L.52, T.53, L.55, A.56, D.57, E.59, W.89, L.90, L.93, M.94, L.97, R.100, F.110, E.125, M.127, I.130, L.134, G.227, H.230, L.231, N.238, V.239, V.240, P.241, L.245 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:A.56, A:A.56, A:W.89, A:F.110, A:I.130, A:L.134, A:L.231 Hydrogen bonds: A:L.93 Water bridges: A:R.100 Salt bridges: A:D.57, A:R.100 pi-Stacking: A:F.110 L5B.2: 27 residues within 4Å: Chain B: M.49, L.52, T.53, L.55, A.56, D.57, E.59, L.60, L.90, L.93, M.94, L.97, R.100, F.110, E.125, M.127, I.130, L.134, G.227, H.230, L.231, M.234, N.238, V.239, V.240, P.241, L.245 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:A.56, B:A.56, B:F.110, B:I.130, B:L.134, B:L.231 Hydrogen bonds: B:E.59, B:L.93 Water bridges: B:R.100 Salt bridges: B:D.57, B:R.100 pi-Stacking: B:F.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El-Ahmad, Y. et al., Discovery of 6-(2,4-Dichlorophenyl)-5-[4-[(3S)-1-(3-fluoropropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7H-benzo[7]annulene-2-carboxylic acid (SAR439859), a Potent and Selective Estrogen Receptor Degrader (SERD) for the Treatment of Estrogen-Receptor-Positive Breast Cancer. J.Med.Chem. (2020)

Release Date

2019-11-27

Peptides

Estrogen receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Estrogen receptor