SMTL ID : 6scd.1 (1 other biounit)

Polyester hydrolase PE-H Y250S mutant of Pseudomonas aestusnigri

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.72, G.73, F.74, N.125, R.136 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.73, A:N.125 Water bridges: A:F.74, A:N.125 Salt bridges: A:R.136

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: P.132, R.179, T.197, T.198, Y.201 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.201, A:Y.201 Water bridges: A:R.179, A:T.197 Salt bridges: A:R.179 PO4.3: 4 residues within 4Å: Chain A: R.44, G.45, Q.59, Y.60 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.45, A:Q.59, A:Y.60 Water bridges: A:Q.43, A:R.44, A:R.44

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: T.290, S.291, D.292, I.295 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.291

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 4 residues within 4Å: Chain A: D.217, V.218, S.248, H.249 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: F.98, S.171, M.172 Ligand excluded by PLIP

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.7: 5 residues within 4Å: Chain A: V.99, S.100, T.124, T.126, G.127 3 PLIP interactions: 3 interactions with chain A Water bridges: A:T.124, A:G.127, A:G.127

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.8: 4 residues within 4Å: Chain A: S.235, K.239, G.300, N.301 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.239, A:N.301 Water bridges: A:G.300 GOL.9: 3 residues within 4Å: Chain A: E.54, A.55, D.56 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.56 Water bridges: A:D.56

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.10: 7 residues within 4Å: Chain A: S.235, S.236, I.237, D.238, N.301, P.303, Y.304 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.236

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bollinger, A. et al., A Novel Polyester Hydrolase From the Marine BacteriumPseudomonas aestusnigri -Structural and Functional Insights. Front Microbiol (2020)

Release Date

2020-02-26

Peptides

Polyester hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polyester hydrolase

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