SMTL ID : 6sdb.1 (4 other biounits)

Chimeric titin Z1Z2 functionalized with a KLER exogenous peptide from decorin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

6 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: K.73, K.99, A.100, E.101 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:A.100, A:E.101 Water bridges: A:K.99, A:K.99 Salt bridges: A:K.73, A:K.99 ACT.2: 2 residues within 4Å: Chain A: K.137, R.185 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.139 Salt bridges: A:K.137, A:R.185 ACT.3: 2 residues within 4Å: Chain A: Q.146, S.147 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.147 ACT.4: 4 residues within 4Å: Chain A: S.16, R.78, T.93, E.95 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.78, A:E.95 Hydrogen bonds: A:S.16, A:S.16 ACT.5: 2 residues within 4Å: Chain A: R.185 Ligands: ACT.6 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.185, A:T.187 Salt bridges: A:R.185 ACT.6: 5 residues within 4Å: Chain A: G.142, S.176, N.178, T.187 Ligands: ACT.5 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.187 Hydrogen bonds: A:S.176, A:S.176, A:N.178 Water bridges: A:G.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nesterenko, Y. et al., The ZT Biopolymer: A Self-Assembling Protein Scaffold for Stem Cell Applications. Int J Mol Sci (2019)

Release Date

2019-09-18

Peptides

Titin,Decorin,Titin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Titin,Decorin,Titin

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