SMTL ID : 6sei.1

Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

hetero-2-2-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.229, C.232, H.256, C.259 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.229, A:C.232, A:H.256, A:C.259 ZN.2: 4 residues within 4Å: Chain A: C.246, C.251, C.280, C.283 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.246, A:C.251, A:C.280, A:C.283 ZN.4: 4 residues within 4Å: Chain C: C.229, C.232, H.256, C.259 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.229, C:C.232, C:H.256, C:C.259 ZN.5: 4 residues within 4Å: Chain C: C.246, C.251, C.280, C.283 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.246, C:C.251, C:C.280, C:C.283

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 2 residues within 4Å: Chain B: D.66, D.71 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.66, B:D.71, H2O.4 CA.6: 2 residues within 4Å: Chain C: F.171, G.173 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:F.171, C:G.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaur, V. et al., Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease. Nucleic Acids Res. (2019)

Release Date

2019-09-25

Peptides

Structure-specific endonuclease subunit SLX1: AC
Structure-specific endonuclease subunit SLX4: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Structure-specific endonuclease subunit SLX1

Structure-specific endonuclease subunit SLX4

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