SMTL ID : 6sff.1

mouse Interleukin-12 subunit beta - p80 homodimer in space group I41

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN.1: 13 residues within 4Å: Chain A: M.23, W.24, E.25, V.32, E.34, T.45, V.46, H.105, W.112, A.209, E.211, Y.218, N.220 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.112 Hydrogen bonds: A:E.34 NAG-NAG-BMA-MAN-MAN-MAN.3: 13 residues within 4Å: Chain B: M.23, W.24, E.25, V.32, E.34, T.45, V.46, H.105, W.112, A.209, E.211, Y.218, N.220 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:W.112 Hydrogen bonds: B:E.34

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: L.126, K.127, C.128, T.223, F.225, I.230 Ligand excluded by PLIP CL.4: 6 residues within 4Å: Chain B: L.126, K.127, C.128, T.223, F.225, I.230 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kozak, S. et al., Homogeneously N-glycosylated proteins derived from the GlycoDelete HEK293 cell line enable diffraction-quality crystallogenesis. Acta Crystallogr D Struct Biol (2020)

Release Date

2020-08-26

Peptides

Interleukin-12 subunit beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Interleukin-12 subunit beta

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