SMTL ID : 6sgd.1

Nek2 kinase covalently bound to 2-arylamino-6-ethynylpurine inhibitor 24

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: E.90 Ligands: LD5.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.90

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: R.234, R.235 Ligand excluded by PLIP

1 x LD5: 4-[(6-ethenyl-7~{H}-purin-2-yl)amino]benzenesulfonamide(Covalent)

LD5.4: 14 residues within 4Å: Chain A: I.14, C.22, V.35, V.68, M.86, E.87, Y.88, C.89, E.90, G.92, D.93, S.96, F.148 Ligands: NA.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.14, A:Y.88, A:F.148 Hydrogen bonds: A:C.89, A:C.89, A:S.96, A:S.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matheson, C.J. et al., 2-Arylamino-6-ethynylpurines are cysteine-targeting irreversible inhibitors of Nek2 kinase. Rsc Med Chem (2020)

Release Date

2020-06-17

Peptides

Serine/threonine-protein kinase Nek2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase Nek2

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