SMTL ID : 6si1.1 (1 other biounit)

p53 cancer mutant Y220H

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.83, H.86, C.145, C.149 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.83, A:H.86, A:C.145, A:C.149

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: N.38, S.176 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.38, A:S.176 Water bridges: A:Q.7

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: R.81, Q.99, D.114, F.119, H.121 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.81, A:R.81, A:D.115, A:H.121 Water bridges: A:Q.99

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.4: 4 residues within 4Å: Chain A: K.8, Y.10, L.171, R.174 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.174 Salt bridges: A:R.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bauer, M.R. et al., Targeting Cavity-Creating p53 Cancer Mutations with Small-Molecule Stabilizers: the Y220X Paradigm. Acs Chem.Biol. (2020)

Release Date

2020-02-19

Peptides

Cellular tumor antigen p53: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellular tumor antigen p53

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