SMTL ID : 6sl9.1

High resolution apo structure of isomerase PaaG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.27 Å

Oligo State

homo-trimer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: N.2, L.7, K.8 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.8, A:K.8, A:K.8 GOL.2: 3 residues within 4Å: Chain A: Y.37, A.38, K.41 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.41 Water bridges: A:Y.37 GOL.3: 3 residues within 4Å: Chain B: N.2, L.7, K.8 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.8, B:K.8, B:K.8 GOL.4: 3 residues within 4Å: Chain B: Y.37, A.38, K.41 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.41 Water bridges: B:Y.37 GOL.5: 3 residues within 4Å: Chain C: N.2, L.7, K.8 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:K.8, C:K.8, C:K.8 GOL.6: 3 residues within 4Å: Chain C: Y.37, A.38, K.41 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.41 Water bridges: C:Y.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Spieker, M. et al., Structural and Mechanistic Basis of an Oxepin-CoA Forming Isomerase in Bacterial Primary and Secondary Metabolism. Acs Chem.Biol. (2019)

Release Date

2019-12-11

Peptides

Enoyl-CoA hydratase/carnithine racemase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
AAA

C
AAA

Enoyl-CoA hydratase/carnithine racemase