SMTL ID : 6srd.1 (1 other biounit)

Structure of Rex8A from Paenibacillus barcinonensis complexed with xylose.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x XYP: beta-D-xylopyranose(Non-covalent)

XYP.1: 10 residues within 4Å: Chain A: D.61, N.64, R.68, E.70, S.264, D.265, H.321, Y.360, Y.361 Ligands: GOL.3 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.61, A:D.61, A:N.64, A:R.68, A:E.70, A:S.264, A:R.358 Water bridges: A:D.61 Salt bridges: A:H.321

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: F.132, H.201, A.271, N.272, L.275, M.331, F.368, Y.377 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.201, A:Y.377 Water bridges: A:T.369 GOL.3: 8 residues within 4Å: Chain A: R.68, E.70, W.112, A.126, D.128, Y.197, R.268 Ligands: XYP.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.68, A:E.70, A:R.268, A:R.268 Water bridges: A:S.69, A:E.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jimenez-Ortega, E. et al., Structural analysis of the reducing-end xylose-releasing exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 deciphers its molecular specificity. Febs J. (2020)

Release Date

2020-05-27

Peptides

Reducing-end xylose-releasing exo-oligoxylanase Rex8A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Reducing-end xylose-releasing exo-oligoxylanase Rex8A

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