- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.73 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x EVB: sulfonato-calix[8]arene(Non-covalent)
- 9 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 1 residues within 4Å:- Ligands: EVB.1
No protein-ligand interaction detected (PLIP)GOL.3: 7 residues within 4Å:- Chain A: R.17, E.28, A.40, F.41, I.61, W.76, W.81
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:R.17, A:E.28, A:A.40, A:F.41, A:W.81
- Water bridges: A:D.32, A:Y.37
GOL.4: 8 residues within 4Å:- Chain A: R.62, E.73, G.84, A.85, Y.86
- Chain B: I.16, W.31, W.36
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.62, A:A.85, A:Y.86
GOL.7: 1 residues within 4Å:- Ligands: EVB.6
No protein-ligand interaction detected (PLIP)GOL.8: 7 residues within 4Å:- Chain B: R.17, E.28, A.40, F.41, I.61, W.76, W.81
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:R.17, B:E.28, B:A.40, B:F.41, B:W.81
- Water bridges: B:D.32, B:Y.37
GOL.9: 8 residues within 4Å:- Chain B: R.62, E.73, G.84, A.85, Y.86
- Chain C: I.16, W.31, W.36
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.62, B:A.85, B:Y.86
GOL.12: 1 residues within 4Å:- Ligands: EVB.11
No protein-ligand interaction detected (PLIP)GOL.13: 7 residues within 4Å:- Chain C: R.17, E.28, A.40, F.41, I.61, W.76, W.81
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:R.17, C:E.28, C:A.40, C:F.41, C:W.81
- Water bridges: C:D.32, C:Y.37
GOL.14: 8 residues within 4Å:- Chain A: I.16, W.31, W.36
- Chain C: R.62, E.73, G.84, A.85, Y.86
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:R.62, C:A.85, C:Y.86
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 4 residues within 4Å:- Chain A: A.40, W.76, G.80, W.81
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:W.81, A:W.81
- Water bridges: A:R.43, A:R.43, A:R.43, A:R.43
SO4.10: 4 residues within 4Å:- Chain B: A.40, W.76, G.80, W.81
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:W.81, B:W.81
- Water bridges: B:R.43, B:R.43, B:R.43, B:R.43
SO4.15: 4 residues within 4Å:- Chain C: A.40, W.76, G.80, W.81
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:W.81, C:W.81
- Water bridges: C:R.43, C:R.43, C:R.43, C:R.43
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Skorek, T. et al., Highly cationic RSL-R8 in complex with sulfonato-calix[8]arene. To Be Published
- Release Date
- 2020-09-30
- Peptides
- Fucose-binding lectin protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.73 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x EVB: sulfonato-calix[8]arene(Non-covalent)
- 9 x GOL: GLYCEROL(Non-functional Binders)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Skorek, T. et al., Highly cationic RSL-R8 in complex with sulfonato-calix[8]arene. To Be Published
- Release Date
- 2020-09-30
- Peptides
- Fucose-binding lectin protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B