SMTL ID : 6szj.1

RIP2 Kinase Catalytic Domain complex with 5amino1tertbutyl3(3methoxyphenyl)1H pyrazole4carboxamide.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

homo-dimer

Ligands

2 x M5W: 5-amino-1-~{tert}-butyl-3-(3-methoxyphenyl)pyrazole-4-carboxamide(Non-covalent)

M5W.1: 16 residues within 4Å: Chain A: L.25, S.26, V.33, A.46, V.47, K.48, L.80, I.94, T.96, E.97, Y.98, M.99, G.102, E.106, L.154, A.164 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.25, A:V.33, A:K.48, A:L.80, A:L.154, A:A.164 Hydrogen bonds: A:E.97, A:M.99, A:M.99 Water bridges: A:G.102 M5W.3: 14 residues within 4Å: Chain B: S.26, V.33, A.46, V.47, K.48, L.80, I.94, T.96, E.97, Y.98, M.99, G.102, L.154, A.164 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:K.48, B:L.80, B:L.154, B:A.164 Hydrogen bonds: B:T.96, B:E.97, B:M.99, B:M.99 Water bridges: B:G.102

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 2 residues within 4Å: Chain B: Q.309, K.311 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haffner, C.D. et al., Discovery of Pyrazolocarboxamides as Potent and Selective Receptor Interacting Protein 2 (RIP2) Kinase Inhibitors. Acs Med.Chem.Lett. (2019)

Release Date

2019-12-04

Peptides

Receptor-interacting serine/threonine-protein kinase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-interacting serine/threonine-protein kinase 2

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