SMTL ID : 6t2d.1

Multicomponent Peptide Stapling as a Diversity-Driven Tool for the Development of Inhibitors of Protein-Protein Interactions

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 5 residues within 4Å: Chain A: R.74, K.75, T.78, M.79, R.82 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.74, A:K.75, A:R.82, A:R.82

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 0 residues within 4Å: (No contacts) 2 PLIP interactions: 2 interactions with chain A Water bridges: A:T.24 Salt bridges: A:D.23

1 x M9E: 2-(methylamino)-~{N}-[[4-[[2-(methylamino)ethanoylamino]methyl]phenyl]methyl]ethanamide(Covalent)

M9E.3: 6 residues within 4Å: Chain A: F.32, Q.36, M.39 Chain B: L.1, E.4, E.11 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ricardo, M.G. et al., Multicomponent Peptide Stapling as a Diversity-Driven Tool for the Development of Inhibitors of Protein-Protein Interactions. Angew.Chem.Int.Ed.Engl. (2020)

Release Date

2020-01-29

Peptides

E3 ubiquitin-protein ligase Mdm2: A
Stapled peptide GAR300-Gp: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 ubiquitin-protein ligase Mdm2

Stapled peptide GAR300-Gp

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