SMTL ID : 6t4e.1

Native C3-like protease from Southampton virus complexed with FMOPL000287a.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

hetero-1-1-mer

Ligands

2 x HWH: ~{N}-[2-(5-fluoranyl-1~{H}-indol-3-yl)ethyl]ethanamide(Non-covalent)

HWH.1: 8 residues within 4Å: Chain A: W.6, S.7, V.9, T.10, W.19, F.40, R.65, K.88 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.65 HWH.2: 3 residues within 4Å: Chain B: G.79, V.81, R.99 3 PLIP interactions: 3 interactions with chain B Water bridges: B:G.79, B:V.81 pi-Cation interactions: B:R.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, J. et al., In crystallo-screening for discovery of human norovirus 3C-like protease inhibitors. J Struct Biol X (2020)

Release Date

2020-08-19

Peptides

Genome polyprotein: A
Genome polyprotein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Genome polyprotein

Genome polyprotein

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