SMTL ID : 6t5g.1

Structure of Human Aldose Reductase Mutant L300A with a Citrate Molecule Bound in the Anion Binding Pocket

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.28 Å

Oligo State

monomer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 9 residues within 4Å: Chain A: W.21, Y.49, W.80, H.111, W.112, F.123, W.220, C.299 Ligands: NAP.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.21, A:Y.49, A:W.112 Salt bridges: A:H.111 CIT.2: 9 residues within 4Å: Chain A: P.25, H.47, Q.50, N.51, E.52, N.53, E.54, K.95, D.99 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.53 Water bridges: A:H.47, A:H.47, A:Q.50, A:E.54, A:D.99, A:D.99 Salt bridges: A:K.95, A:K.95

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.3: 31 residues within 4Å: Chain A: G.19, T.20, W.21, D.44, Y.49, K.78, H.111, W.112, S.160, N.161, Q.184, Y.210, S.211, P.212, L.213, G.214, S.215, P.216, D.217, L.229, A.246, I.261, P.262, K.263, S.264, V.265, T.266, R.269, N.273, C.299 Ligands: CIT.1 33 PLIP interactions: 33 interactions with chain A Hydrophobic interactions: A:W.21 Hydrogen bonds: A:T.20, A:W.21, A:D.44, A:D.44, A:H.111, A:W.112, A:N.161, A:Q.184, A:Y.210, A:S.211, A:S.211, A:L.213, A:S.215, A:S.215, A:S.215, A:D.217, A:D.217, A:K.263, A:S.264, A:V.265, A:T.266, A:T.266, A:N.273, A:N.273 Water bridges: A:K.263, A:K.263, A:R.269, A:R.269 Salt bridges: A:K.263, A:R.269 pi-Stacking: A:Y.210 pi-Cation interactions: A:R.269

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hubert, L.-S. et al., Structure of Human Aldose Reductase Mutant L300A with a Citrate Molecule Bound in the Anion Binding Pocket. To Be Published

Release Date

2020-11-18

Peptides

Aldo-keto reductase family 1 member B1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aldo-keto reductase family 1 member B1

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