SMTL ID : 6t9t.1

Matriptase in complex with the synthetic inhibitor (S)-3-(3-(4-(3-(tert-butyl)ureido)piperidin-1-yl)-2-((3'-fluoro-4'-(hydroxymethyl)-[1,1'-biphenyl])-3-sulfonamido)-3-oxopropyl)benzimidamide (MI-1904)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: R.155, F.179 Ligand excluded by PLIP

1 x MXH: 1-~{tert}-butyl-3-[1-[(2~{S})-3-(3-carbamimidoylphenyl)-2-[[3-[3-fluoranyl-4-(hydroxymethyl)phenyl]phenyl]sulfonylamino ]propanoyl]piperidin-4-yl]urea(Non-covalent)

MXH.2: 23 residues within 4Å: Chain A: H.42, I.45, D.47, D.91, F.92, T.93, F.94, Y.141, Q.169, D.185, S.186, C.187, Q.188, S.191, V.210, S.211, W.212, G.213, D.214, G.215, C.216, G.223, V.224 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:D.47, A:F.94, A:V.210, A:W.212 Hydrogen bonds: A:D.185, A:S.186, A:S.186, A:G.213, A:G.215 Water bridges: A:T.93, A:Q.168, A:Q.169, A:V.224 pi-Stacking: A:F.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pilgram, O. et al., Improving the selectivity of 3-amidinophenylalanine-derived matriptase inhibitors. Eur.J.Med.Chem. (2022)

Release Date

2020-11-18

Peptides

Suppressor of tumorigenicity 14 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Suppressor of tumorigenicity 14 protein

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