SMTL ID : 6tcu.1

Glycogen synthase kinase-3 beta (GSK3b) in complex with ligand 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x N1Q: 5-[2,3-bis(fluoranyl)phenyl]-~{N}-[[1-(2-methoxyethyl)piperidin-4-yl]methyl]-1~{H}-indazole-3-carboxamide(Non-covalent)

N1Q.1: 15 residues within 4Å: Chain A: F.36, V.39, A.52, K.54, L.101, D.102, Y.103, V.104, P.105, T.107, R.110, N.155, L.157, C.168, D.169 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.52, A:L.101, A:L.157, A:D.169 Hydrogen bonds: A:V.104, A:V.104, A:V.104

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: R.65, R.149, K.174, N.182, V.183 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.183 Salt bridges: A:R.65, A:R.149, A:K.174 ACT.3: 3 residues within 4Å: Chain A: Y.25, K.55, N.98 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.25 Salt bridges: A:K.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prati, F. et al., Optimization of Indazole-Based GSK-3 Inhibitors with Mitigated hERG Issue andIn VivoActivity in a Mood Disorder Model. Acs Med.Chem.Lett. (2020)

Release Date

2020-09-16

Peptides

Glycogen synthase kinase-3 beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycogen synthase kinase-3 beta