SMTL ID : 6tdb.4 (3 other biounits)

Neuropilin2-b1 domain in a complex with the C-terminal VEGFB167 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

monomer

Ligands

1 x LEU- ARG- ARG: C-terminal VEGFB167 peptide(Non-covalent)

LEU-ARG-ARG.1: 10 residues within 4Å: Chain A: Y.28, W.33, T.48, D.52, S.78, E.80, T.81, Y.85, G.146, I.147 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.33, A:E.80, A:Y.85 Hydrogen bonds: A:Y.28, A:T.48, A:S.78, A:T.81, A:T.81, A:Y.85, A:I.147, A:I.147 Salt bridges: A:D.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eldrid, C. et al., NRP2-b1 domain in a complex with the C-terminal VEGFB167 peptide. To Be Published

Release Date

2020-11-18

Peptides

Neuropilin-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Neuropilin-2

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