SMTL ID : 6tdc.1

PPAR gamma ligand binding domain in complex with MRL-871

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

monomer

Ligands

1 x 4F1: 4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-1H-indazol-3-yl}benzoic acid(Non-covalent)

4F1.1: 17 residues within 4Å: Chain A: F.97, C.100, Q.101, R.103, S.104, I.141, L.145, M.149, V.154, I.156, S.157, L.168, F.178, M.179, K.182, F.183, H.264 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.97, A:Q.101, A:R.103, A:L.145, A:L.145, A:V.154, A:I.156, A:L.168, A:F.178, A:M.179, A:K.182, A:F.183 Hydrogen bonds: A:S.157, A:K.182 Salt bridges: A:R.103

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: T.53, G.54, K.55 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.53, A:K.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leijten-van de Gevel, I.A. et al., Binding of PPAR(gamma) to MRL871. To Be Published

Release Date

2020-11-18

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor gamma

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