SMTL ID : 6tha.1

Crystal structure of human sugar transporter GLUT1 (SLC2A1) in the inward conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x BNG: nonyl beta-D-glucopyranoside(Non-covalent)

BNG.1: 16 residues within 4Å: Chain A: T.30, P.141, Q.161, V.165, I.168, Q.282, Q.283, N.288, F.291, N.317, F.379, E.380, G.384, P.385, N.415 Ligands: P33.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:P.141, A:Q.161, A:P.385 Hydrogen bonds: A:Q.282, A:Q.283, A:N.288, A:N.288, A:N.317, A:N.317 BNG.2: 5 residues within 4Å: Chain A: R.93, N.94, E.209, R.218, R.223 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.94, A:N.94, A:E.209, A:R.218, A:R.218

1 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)

P33.3: 12 residues within 4Å: Chain A: F.26, S.80, T.137, G.138, P.141, M.142, W.388, I.404, G.408, N.411, W.412 Ligands: BNG.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.137

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: R.92, R.93, E.209, S.210, F.213 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Custodio, T.F. et al., Structural comparison of GLUT1 to GLUT3 reveal transport regulation mechanism in sugar porter family. Life Sci Alliance (2021)

Release Date

2020-11-25

Peptides

Solute carrier family 2, facilitated glucose transporter member 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Solute carrier family 2, facilitated glucose transporter member 1