- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.03 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CTP: CYTIDINE-5'-TRIPHOSPHATE(Non-covalent)
- 2 x CA: CALCIUM ION(Non-covalent)
CA.2: 4 residues within 4Å:- Chain A: D.104
- Chain B: R.30, K.114
- Ligands: CTP.1
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.104, A:D.104, H2O.1, H2O.6
CA.7: 2 residues within 4Å:- Chain B: D.104
- Ligands: CTP.6
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.104, B:D.104, H2O.3, H2O.5
- 3 x N9N: (4-hydroxyphenyl)-[2,3,4-tris(oxidanyl)phenyl]methanone(Non-covalent)
N9N.3: 12 residues within 4Å:- Chain A: I.32, A.103, D.104, F.105, L.127
- Chain B: L.26, R.30, I.115, P.122, S.124, I.125
- Ligands: ACT.5
13 PLIP interactions:8 interactions with chain B, 5 interactions with chain A- Hydrophobic interactions: B:L.26, B:L.26, B:L.26, B:I.115, B:P.122, B:I.125, B:I.125, A:I.32, A:L.127
- Water bridges: B:H.109
- Hydrogen bonds: A:D.104, A:F.105, A:F.105
N9N.8: 11 residues within 4Å:- Chain A: L.26, R.30, I.115, S.124, I.125
- Chain B: I.32, A.103, D.104, F.105, L.127
- Ligands: ACT.4
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:I.32, B:L.127, A:L.26, A:I.115, A:I.125
- Hydrogen bonds: B:D.104, B:F.105, B:F.105
N9N.9: 10 residues within 4Å:- Chain B: R.83, V.86, S.87, A.90, D.131, D.132, V.133, G.136, A.137, R.139
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:R.83, B:V.86, B:A.137
- Hydrogen bonds: B:V.86, B:R.139
- pi-Cation interactions: B:R.83
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 7 residues within 4Å:- Chain A: R.30
- Chain B: I.32, G.33, N.34, A.103, D.104
- Ligands: N9N.8
5 PLIP interactions:4 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:I.32, B:A.103
- Hydrogen bonds: B:N.34, B:D.104
- Salt bridges: A:R.30
ACT.5: 7 residues within 4Å:- Chain A: I.32, G.33, N.34, A.103, D.104
- Chain B: R.30
- Ligands: N9N.3
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain A- Salt bridges: B:R.30
- Hydrophobic interactions: A:I.32, A:A.103
- Hydrogen bonds: A:N.34, A:D.104
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mendes, V. et al., Inhibiting Mycobacterium tuberculosis CoaBC by targeting an allosteric site. Nat Commun (2021)
- Release Date
- 2020-11-25
- Peptides
- Coenzyme A biosynthesis bifunctional protein CoaBC: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.03 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CTP: CYTIDINE-5'-TRIPHOSPHATE(Non-covalent)
- 2 x CA: CALCIUM ION(Non-covalent)
- 3 x N9N: (4-hydroxyphenyl)-[2,3,4-tris(oxidanyl)phenyl]methanone(Non-covalent)
- 2 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mendes, V. et al., Inhibiting Mycobacterium tuberculosis CoaBC by targeting an allosteric site. Nat Commun (2021)
- Release Date
- 2020-11-25
- Peptides
- Coenzyme A biosynthesis bifunctional protein CoaBC: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D