SMTL ID : 6tj1.1

Crystal structure of a de novo designed hexameric helical-bundle protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-hexamer

Ligands

2 x ALA- ALA- LEU- ALA- ALA- ALA: purification tag(Non-covalent)

ALA-ALA-LEU-ALA-ALA-ALA.1: 11 residues within 4Å: Chain A: E.23, I.26, R.27, R.30, E.34, E.37, I.84, L.88 Chain F: T.22, E.25, L.29 8 PLIP interactions: 6 interactions with chain A, 2 interactions with chain F Hydrophobic interactions: A:E.23, A:I.26, A:R.27, A:I.84, A:L.88, F:T.22, F:L.29 Hydrogen bonds: A:E.34 ALA-ALA-LEU-ALA-ALA-ALA.2: 11 residues within 4Å: Chain C: T.22, E.25, L.29 Chain D: E.23, I.26, R.27, R.30, E.34, E.37, I.84, L.88 9 PLIP interactions: 7 interactions with chain D, 2 interactions with chain C Hydrophobic interactions: D:E.23, D:I.26, D:R.27, D:I.84, D:L.88, C:T.22, C:L.29 Hydrogen bonds: D:E.34, D:E.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., Computational design of transmembrane pores. Nature (2020)

Release Date

2020-04-29

Peptides

De novo designed WSHC6: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

De novo designed WSHC6