SMTL ID : 6tjf.1 (1 other biounit)

Crystal structure of the computationally designed Cake6 protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-trimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: N.75, K.96, A.97, N.115 Chain B: K.173 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:K.173, B:K.173, A:N.75, A:A.97, A:N.115 GOL.2: 6 residues within 4Å: Chain B: K.16, K.56, A.57, N.75 Chain C: K.213, G.215 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain C Hydrogen bonds: B:K.16, B:K.16, B:A.57, B:N.75, C:K.213, C:K.213 GOL.3: 5 residues within 4Å: Chain B: K.93, G.95 Chain C: K.176, A.177, N.195 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:K.176, C:A.177, C:N.195, B:K.93, B:K.93, B:G.95 GOL.4: 5 residues within 4Å: Chain A: K.53 Chain B: N.195, K.216, A.217, N.235 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.195, B:A.217, B:N.235, A:K.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mylemans, B. et al., Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J. (2021)

Release Date

2020-05-06

Peptides

Cake6: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

C
F

Cake6

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