SMTL ID : 6tlb.1

Plasmodium falciparum lipocalin (PF3D7_0925900)

Coordinates

PDB Format Compare

Method

SOLUTION SCATTERING 2.85 Å

Oligo State

homo-tetramer

Ligands

3 x NA: SODIUM ION(Non-functional Binders)

NA.1: 1 residues within 4Å: Chain A: C.47 No protein-ligand interaction detected (PLIP) NA.4: 3 residues within 4Å: Chain B: C.47, Q.189, D.191 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.191 NA.5: 1 residues within 4Å: Chain B: Y.110 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.110

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: W.184, I.188, Q.189 Chain B: Q.189 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:Q.189, A:Q.189, A:Q.189 GOL.3: 5 residues within 4Å: Chain B: D.60, Y.65, K.88, I.90, Q.117 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.88, B:Q.117 GOL.6: 9 residues within 4Å: Chain C: K.40, C.47, R.48, I.188, Q.189, T.190, D.191 Chain D: W.184 Ligands: GOL.7 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.40, C:D.191 GOL.7: 6 residues within 4Å: Chain C: I.188, Q.189 Chain D: W.184, I.188, Q.189 Ligands: GOL.6 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Q.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burda, P.C. et al., Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum. Cell Rep (2020)

Release Date

2020-06-24

Peptides

Serine/threonine protein kinase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

C
A

D
C

Serine/threonine protein kinase