SMTL ID : 6tly.1

Crystal structure of the unconventional kinetochore protein Bodo saltans KKT2 central domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.11, H.15, C.51, K.53, C.54 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.11, A:H.15, A:C.51, A:C.54 ZN.2: 4 residues within 4Å: Chain A: C.32, C.35, C.59, C.62 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.32, A:C.35, A:C.59, A:C.62 ZN.3: 4 residues within 4Å: Chain A: C.75, C.78, H.91, C.95 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.75, A:C.78, A:H.91, A:C.95

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: S.84, Q.85, T.86 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.85, A:T.86, A:T.86 Water bridges: A:S.84, A:S.84, A:Q.85 SO4.5: 4 residues within 4Å: Chain A: G.1, S.2, H.15, K.53 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.2 Water bridges: A:G.1 Salt bridges: A:H.15, A:K.53

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 1 residues within 4Å: Chain A: R.14 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marciano, G. et al., Kinetoplastid kinetochore proteins KKT2 and KKT3 have unique centromere localization domains. J.Cell Biol. (2021)

Release Date

2019-12-25

Peptides

Protein kinase, putative: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein kinase, putative