SMTL ID : 6tmd.1

Crystal structure of KANK2 ankyrin repeats mutant (A670V)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: D.17, S.20, A.21, V.42, A.43, T.46 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.17, A:S.20 Water bridges: A:S.20, A:A.43 GOL.2: 2 residues within 4Å: Chain A: K.27, E.39 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.27, A:K.27 GOL.4: 4 residues within 4Å: Chain A: I.223, S.224, T.232, L.234 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.232, A:T.232 Water bridges: A:L.234

5 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 2 residues within 4Å: Chain A: E.26, M.75 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.26 Water bridges: A:E.26 ACT.5: 3 residues within 4Å: Chain A: L.147, R.151, C.185 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.147, A:R.151 Salt bridges: A:R.151 ACT.6: 3 residues within 4Å: Chain A: N.92, S.100, L.131 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.92, A:S.100, A:N.122 ACT.7: 3 residues within 4Å: Chain A: K.180, A.184, L.214 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.214 Hydrogen bonds: A:K.180, A:A.184 ACT.8: 3 residues within 4Å: Chain A: D.194, G.196, R.228 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Khan, R. et al., Crystal structure of KANK2 ankyrin repeats mutant (A670V). To be published

Release Date

2020-12-16

Peptides

KN motif and ankyrin repeat domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

KN motif and ankyrin repeat domain-containing protein 2