- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 29 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 4 x ZN: ZINC ION(Non-covalent)
ZN.28: 5 residues within 4Å:- Chain Q: C.21, R.23, C.24, C.39, C.42
4 PLIP interactions:4 interactions with chain Q- Metal complexes: Q:C.21, Q:C.24, Q:C.39, Q:C.42
ZN.29: 5 residues within 4Å:- Chain W: C.25, C.28, G.29, C.48, C.51
4 PLIP interactions:4 interactions with chain W- Metal complexes: W:C.25, W:C.28, W:C.48, W:C.51
ZN.30: 5 residues within 4Å:- Chain W: C.7, S.9, C.10, C.36, C.39
4 PLIP interactions:4 interactions with chain W- Metal complexes: W:C.7, W:C.10, W:C.36, W:C.39
ZN.31: 5 residues within 4Å:- Chain Y: C.18, C.21, N.23, C.37, C.40
3 PLIP interactions:3 interactions with chain Y- Metal complexes: Y:C.18, Y:C.37, Y:C.40
- 2 x SF4: IRON/SULFUR CLUSTER(Covalent)(Non-covalent)
SF4.32: 10 residues within 4Å:- Chain 3: C.24, V.26, A.33, I.34, C.51, I.52, G.53, C.54, G.55, C.57
5 PLIP interactions:5 interactions with chain 3,- Metal complexes: 3:C.24, 3:C.51, 3:G.53, 3:C.54, 3:C.57
SF4.33: 10 residues within 4Å:- Chain 3: C.11, K.12, C.16, E.19, C.20, P.44, C.61, Y.63, A.65, I.66
2 PLIP interactions:2 interactions with chain 3,- Metal complexes: 3:C.11, 3:C.61
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
ANP.34: 20 residues within 4Å:- Chain 3: Y.83, F.88, N.108, G.109, V.110, G.111, K.112, T.113, T.114, Q.167, H.269, S.289, D.459, L.460, S.461, G.462, G.463, E.464, Y.489
- Ligands: MG.35
20 PLIP interactions:20 interactions with chain 3- Hydrogen bonds: 3:K.107, 3:N.108, 3:G.109, 3:V.110, 3:G.111, 3:K.112, 3:K.112, 3:T.113, 3:T.113, 3:T.114, 3:T.114, 3:Q.167, 3:Q.167, 3:D.459, 3:G.462, 3:G.463, 3:E.464, 3:Y.489
- pi-Stacking: 3:Y.83, 3:Y.83
ANP.36: 19 residues within 4Å:- Chain 3: K.208, I.212, S.214, G.215, G.216, Y.242, L.353, F.356, N.377, G.378, I.379, G.380, K.381, T.382, T.383, Q.411, H.518, E.538
- Ligands: MG.37
14 PLIP interactions:14 interactions with chain 3- Hydrogen bonds: 3:S.214, 3:G.215, 3:G.216, 3:N.377, 3:G.378, 3:G.378, 3:K.381, 3:K.381, 3:K.381, 3:T.382, 3:T.382, 3:T.383, 3:Q.411, 3:H.518
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nurenberg-Goloub, E. et al., Molecular analysis of the ribosome recycling factor ABCE1 bound to the 30S post-splitting complex. Embo J. (2020)
- Release Date
- 2020-02-12
- Peptides
- 30S ribosomal protein S2: B
30S ribosomal protein S3: C
30S ribosomal protein S3Ae: D
30S ribosomal protein S4: E
30S ribosomal protein S4e: F
30S ribosomal protein S5: G
30S ribosomal protein S6e: H
30S ribosomal protein S7: I
30S ribosomal protein S8: J
30S ribosomal protein S8e: K
30S ribosomal protein S9: L
30S ribosomal protein S10: M
30S ribosomal protein S11: N
30S ribosomal protein S12: O
30S ribosomal protein S13: P
30S ribosomal protein S14 type Z: Q
30S ribosomal protein S15: R
30S ribosomal protein S17: S
30S ribosomal protein S17e: T
30S ribosomal protein S19P: U
30S ribosomal protein S19e: V
RNA-binding protein: W
30S ribosomal protein S24e: X
30S ribosomal protein S27e: Y
30S ribosomal protein S27ae: Z
30S ribosomal protein S28e: 0
50S ribosomal protein L7Ae: 1
LSU ribosomal protein L41E: 2
ATPase: 3 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
UV
VW
WX
XY
YZ
Z0
a1
b2
c3
d
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 29 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x SF4: IRON/SULFUR CLUSTER(Covalent)(Non-covalent)
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nurenberg-Goloub, E. et al., Molecular analysis of the ribosome recycling factor ABCE1 bound to the 30S post-splitting complex. Embo J. (2020)
- Release Date
- 2020-02-12
- Peptides
- 30S ribosomal protein S2: B
30S ribosomal protein S3: C
30S ribosomal protein S3Ae: D
30S ribosomal protein S4: E
30S ribosomal protein S4e: F
30S ribosomal protein S5: G
30S ribosomal protein S6e: H
30S ribosomal protein S7: I
30S ribosomal protein S8: J
30S ribosomal protein S8e: K
30S ribosomal protein S9: L
30S ribosomal protein S10: M
30S ribosomal protein S11: N
30S ribosomal protein S12: O
30S ribosomal protein S13: P
30S ribosomal protein S14 type Z: Q
30S ribosomal protein S15: R
30S ribosomal protein S17: S
30S ribosomal protein S17e: T
30S ribosomal protein S19P: U
30S ribosomal protein S19e: V
RNA-binding protein: W
30S ribosomal protein S24e: X
30S ribosomal protein S27e: Y
30S ribosomal protein S27ae: Z
30S ribosomal protein S28e: 0
50S ribosomal protein L7Ae: 1
LSU ribosomal protein L41E: 2
ATPase: 3 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
UV
VW
WX
XY
YZ
Z0
a1
b2
c3
d